Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4126: 12494 - K20408 WDR24 WD repeat-containing protein 24, at 1410294 to 1414666 12494 mRNA_4127: 12495 - K00793 ribE, RIB5 riboflavin synthase, at 1415327 to 1416353 12495 mRNA_4128: 12496 - K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4, at 1416418 to 1417570 12496 mRNA_4129: 12497 - K03949 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5, at 1418367 to 1418907 12497 mRNA_4130: 12498 - K14812 NGL2 RNA exonuclease NGL2, at 1419173 to 1421594 12498
Group Condition mRNA_4126 mRNA_4127 mRNA_4128 mRNA_4129 mRNA_4130
12494
12495
12496
12497
12498
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   -1.5   0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.7   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.3   -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4   0.2   -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2   -0.1   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   0.0   -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2   0.1   -0.0
growth on oleic acid YNB Glucose -0.0   -0.1   -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.1   -0.1
auxotrophy Dropout Complete 0.3   -0.2   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0   0.1   -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.1   -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.2   0.3
growth on oleic acid YNB Oleic Acid 0.3   -0.1   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.1   -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2   0.1   -0.0
growth on ypd YPD 0.3   0.2   -0.2
auxotrophy YNB Glucose 0.3   0.1   0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.1   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   0.6   -0.3
growth on ricinoleic acid YNB Glucose -0.0   0.5   -0.0
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