Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_4121: 12489 - KOG3195 Uncharacterized membrane protein NPD008/CGI-148, at 1399216 to 1400320
12489
mRNA_4122: 12490 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 1400543 to 1402480
12490
mRNA_4123: 12491 - KOG4510 Permease of the drug/metabolite transporter (DMT) superfamily, at 1402766 to 1404670
12491
mRNA_4124: 12492 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 1405556 to 1407296
12492
mRNA_4125: 12493 - KOG0627 Heat shock transcription factor, at 1407768 to 1409382
12493
Group
Condition
mRNA_4121
mRNA_4122
mRNA_4123
mRNA_4124
mRNA_4125
12489
12490
12491
12492
12493
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
-0.5
-0.2
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.1
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.3
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.0
-0.3
-0.7
growth on oleic acid
YNB Glucose
-0.2
-0.4
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.5
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.5
-0.3
-0.1
-0.6
growth on ypd
YPD
0.1
-0.6
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.3
-0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.5
0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.4
-0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
0.1
0.1
0.2
auxotrophy
Dropout Complete
-0.1
-0.2
0.2
0.1
growth on ricinoleic acid
YNB Glucose
0.2
0.2
-0.1
-0.3
auxotrophy
YNB Glucose
0.3
0.0
0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
0.0
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.3
0.3
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.6
0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.3
0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.4
0.4
0.1
-0.1
remove
mRNA_4121
plot
remove
mRNA_4122
plot
remove
mRNA_4123
remove
mRNA_4124
plot
remove
mRNA_4125
plot