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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4116: 12484 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 1387414 to 1388698
12484
mRNA_4117: 12485 - K15728 LPIN phosphatidate phosphatase LPIN, at 1388981 to 1392980
12485
mRNA_4118: 12486 - Hypothetical Protein, at 1393174 to 1394335
12486
mRNA_4119: 12487 - KOG0118 FOG RRM domain, at 1395124 to 1396771
12487
mRNA_4120: 12488 - Hypothetical Protein, at 1398627 to 1399035
12488
Group
Condition
mRNA_4116
mRNA_4117
mRNA_4118
mRNA_4119
mRNA_4120
12484
12485
12486
12487
12488
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.1
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
0.9
-0.8
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.4
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
-0.7
0.2
growth on ypd
YPD
-0.3
-0.0
-0.7
0.2
growth on oleic acid
YNB Glucose
-0.6
0.2
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.6
0.2
-0.3
0.0
auxotrophy
YNB Glucose
-0.2
-0.1
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
0.0
0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.5
-0.8
0.0
auxotrophy
Dropout Complete
-0.2
0.0
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
0.3
0.1
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
0.3
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.6
-0.2
-0.4
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
0.2
0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.4
-0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.5
0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.6
0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.6
-0.4
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.4
-0.4
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
1.1
0.3
-0.5
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