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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1375596 to 1376142
12478
mRNA_4111: 12479 - K20296 ANG2, VPS51 vacuolar protein sorting-associated protein 51, at 1376562 to 1377671
12479
mRNA_4112: 12480 - HMMPfam-Mannosyltransferase putative-PF11051,SUPERFAMILY--SSF53448, at 1378043 to 1379698
12480
mRNA_4113: 12481 - K02993 RP-S7e, RPS7 small subunit ribosomal protein S7e, at 1380385 to 1381859
12481
mRNA_4114: 12482 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 1382865 to 1383586
12482
Group
Condition
mRNA_4110
mRNA_4111
mRNA_4112
mRNA_4113
mRNA_4114
12478
12479
12480
12481
12482
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.0
-0.8
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.8
0.1
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.1
-0.4
-0.3
growth on ypd
YPD
-1.5
0.2
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
-1.4
0.0
0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
0.3
-0.6
-0.1
growth on oleic acid
YNB Glucose
-0.6
-0.4
-0.0
-0.1
auxotrophy
YNB Glucose
-1.0
0.1
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.4
-0.7
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.1
-0.7
-0.3
auxotrophy
Dropout Complete
-1.6
0.3
0.4
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.5
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.6
0.4
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
-0.3
0.0
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.3
0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.4
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.4
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
0.2
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
1.4
-0.2
-0.0
-0.2
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