Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4108: 12476 - HMMPfam-Aminotransferase class IV-PF01063,SUPERFAMILY--SSF56752, at 1373354 to 1374334 12476 mRNA_4109: 12477 - Hypothetical Protein, at 1374753 to 1375099 12477 mRNA_4110: 12478 - BLAST metal resistance protein ycf1 [Trichosporon asahii va..., at 1375596 to 1376142 12478 mRNA_4111: 12479 - K20296 ANG2, VPS51 vacuolar protein sorting-associated protein 51, at 1376562 to 1377671 12479 mRNA_4112: 12480 - HMMPfam-Mannosyltransferase putative-PF11051,SUPERFAMILY--SSF53448, at 1378043 to 1379698 12480
Group Condition mRNA_4108 mRNA_4109 mRNA_4110 mRNA_4111 mRNA_4112
12476
12477
12478
12479
12480
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.0 -3.0 -0.8 0.2
growth on ypd YPD -0.8 -0.4 -1.5 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 -1.0 -1.8 0.1 -0.0
growth on oleic acid YNB Oleic Acid 0.2 -0.8 -1.4 0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.7 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -1.0 0.3 -0.6
growth on oleic acid YNB Glucose 0.2 -0.6 -0.6 -0.4 -0.0
auxotrophy YNB Glucose 0.1 -0.5 -1.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 -0.3 0.4 -0.7
auxotrophy Dropout Complete -0.1 -0.0 -1.6 0.3 0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 0.1 0.1 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -1.3 0.2 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 -0.7 -0.4 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 -0.4 0.4 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 -0.6 0.4 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 0.1 -0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 1.2 -0.3 -0.5 -0.2
growth on ricinoleic acid YNB Glucose 0.8 0.1 -0.3 0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.7 0.3 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.5 1.2 0.3 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 1.3 1.4 -0.2 -0.0
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