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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1343294 to 1345409
12462
mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1346768 to 1349335
12463
mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1349732 to 1355090
12464
mRNA_4097: 12465 - KOG1339 Aspartyl protease, at 1355805 to 1357462
12465
mRNA_4098: 12466 - K19950 SEC9 protein transport protein SEC9, at 1357850 to 1359153
12466
Group
Condition
mRNA_4094
mRNA_4095
mRNA_4096
mRNA_4097
mRNA_4098
12462
12463
12464
12465
12466
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
0.3
-1.7
growth on ricinoleic acid
YNB Glucose
-0.4
-0.2
0.2
-1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
-0.1
-0.0
-0.6
auxotrophy
YNB Glucose
-0.0
-0.2
-0.1
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.3
0.3
-1.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
-0.1
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.0
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.3
0.0
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.3
-0.3
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.0
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.0
0.1
-0.5
growth on ypd
YPD
0.4
-0.3
-0.0
-0.3
auxotrophy
Dropout Complete
0.1
-0.1
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.2
0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
0.2
0.0
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