Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4093: 12461 - Hypothetical Protein, at 1338946 to 1342318 12461 mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1343294 to 1345409 12462 mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1346768 to 1349335 12463 mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1349732 to 1355090 12464 mRNA_4097: 12465 - KOG1339 Aspartyl protease, at 1355805 to 1357462 12465
Group Condition mRNA_4093 mRNA_4094 mRNA_4095 mRNA_4096 mRNA_4097
12461
12462
12463
12464
12465
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.5 -0.2 0.3 -1.7
growth on ricinoleic acid YNB Glucose 0.2 -0.4 -0.2 0.2 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.0 -0.2 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.5 -0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 -0.9 -0.1 -0.0 -0.6
auxotrophy YNB Glucose 0.5 -0.0 -0.2 -0.1 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 -0.3 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.3 -0.3 0.3 -1.5
auxotrophy YNB Glucose 75mM Methionine 0.5 0.1 -0.1 -0.1 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.0 0.2 0.1 0.0
growth on oleic acid YNB Glucose 0.2 -0.1 -0.2 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 0.1 -0.3 0.0 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1 0.0 0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.2 -0.0 0.0 -0.3
growth on ypd YPD 0.1 0.4 -0.3 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.1 0.1 -0.2 -0.5
auxotrophy Dropout Complete 0.4 0.1 -0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.1 0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 0.2 -0.1 0.2
growth on oleic acid YNB Oleic Acid 0.6 0.1 -0.1 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 0.1 0.2 0.0
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