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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4092: 12460 - KOG0941 E3 ubiquitin protein ligase, at 1337124 to 1338710
12460
mRNA_4093: 12461 - Hypothetical Protein, at 1338946 to 1342318
12461
mRNA_4094: 12462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1343294 to 1345409
12462
mRNA_4095: 12463 - BLAST Valine--tRNA ligase [Rhizoctonia solani], at 1346768 to 1349335
12463
mRNA_4096: 12464 - BLAST bestrophin domain protein [Rhizoctonia solani AG-3 Rh..., at 1349732 to 1355090
12464
Group
Condition
mRNA_4092
mRNA_4093
mRNA_4094
mRNA_4095
mRNA_4096
12460
12461
12462
12463
12464
facs on lipid accumulation
Sorted No BODIPY Gate
-1.9
-0.3
-0.5
-0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.6
-0.9
-0.0
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
-0.1
0.2
-0.3
-0.3
growth on ricinoleic acid
YNB Glucose
-1.7
0.2
-0.4
-0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.4
0.3
-0.5
-0.2
0.3
growth on oleic acid
YNB Glucose
-1.1
0.2
-0.1
-0.2
-0.0
auxotrophy
Dropout Complete
-1.3
0.4
0.1
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-1.1
0.0
0.1
0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-1.3
0.5
0.1
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
0.1
-0.1
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
0.6
0.3
-0.3
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.7
-0.0
0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.5
0.4
0.1
-0.3
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.7
-0.9
-0.1
-0.0
growth on ypd
YPD
-0.4
0.1
0.4
-0.3
-0.0
auxotrophy
YNB Glucose
-0.3
0.5
-0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.2
-0.2
-0.0
0.0
growth on oleic acid
YNB Oleic Acid
-0.8
0.6
0.1
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.6
0.1
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
0.2
0.1
0.2
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