Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4078: 12446 - K15113 SLC25A28_37, MFRN solute carrier family 25 (mitochondrial iron transporter), member 28/37, at 1304560 to 1305720 12446 mRNA_4079: 12447 - KOG2518 5'-3' exonuclease, at 1305952 to 1309026 12447 mRNA_4080: 12448 - Hypothetical Protein, at 1309088 to 1309498 12448 mRNA_4081: 12449 - K09385 FOXG forkhead box protein G, at 1313069 to 1313296 12449 mRNA_4082: 12450 - KOG2194 Aminopeptidases of the M20 family, at 1315930 to 1319483 12450
Group Condition mRNA_4078 mRNA_4079 mRNA_4080 mRNA_4081 mRNA_4082
12446
12447
12448
12449
12450
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -2.1 0.3   0.2
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 -0.2   0.2
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.2   -0.3
ypd buoyancy 40 hrs Median Buoyancy   -0.1 0.0   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 -0.3   -0.1
growth on oleic acid YNB Glucose   0.4 -0.1   -0.3
growth on ypd YPD   -0.3 0.4   -0.1
growth on ricinoleic acid YNB Glucose   0.6 0.0   -0.5
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 -0.1   0.3
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.1   0.3
facs on lipid accumulation Sorted High BODIPY Gate   0.2 0.0   -0.0
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.1   0.1
growth on oleic acid YNB Oleic Acid   0.9 -0.4   -0.2
auxotrophy YNB Glucose 75mM Arginine   0.6 -0.1   -0.2
auxotrophy YNB Glucose   0.7 0.1   -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 0.9   -0.1
auxotrophy YNB Glucose 75mM Methionine   0.6 0.5   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   1.2 0.6   -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   1.6 0.0   -0.3
auxotrophy Dropout Complete   0.5 0.9   0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   1.0 0.8   -0.1
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