Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4062: 12430 - HMMPfam-Protein of unknown function (DUF1115)-PF06544, at 1263570 to 1264744 12430 mRNA_4063: 12431 - K10777 LIG4, DNL4 DNA ligase 4, at 1264892 to 1269621 12431 mRNA_4064: 12432 - HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833, at 1269727 to 1270597 12432 mRNA_4065: 12433 - KOG1198 Zinc-binding oxidoreductase, at 1270736 to 1272325 12433 mRNA_4066: 12434 - K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase, at 1273272 to 1275258 12434
Group Condition mRNA_4062 mRNA_4063 mRNA_4064 mRNA_4065 mRNA_4066
12430
12431
12432
12433
12434
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.4 0.2 -1.7 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.0 0.1 -0.8 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 0.8 -1.7 0.1
growth on ypd YPD 0.3 0.6 0.1 -1.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 0.7 -0.5 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.2 0.3 0.7 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.4 -0.2 0.3 -0.5
growth on ricinoleic acid YNB Glucose 0.1 0.3 -0.1 0.6 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.2 0.1 0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.1 0.1 1.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.2 -0.5 0.9 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.8 -0.2 0.3
growth on oleic acid YNB Glucose 0.0 0.2 0.2 0.4 0.1
growth on oleic acid YNB Oleic Acid 0.4 0.2 0.1 0.1 0.1
auxotrophy YNB Glucose 0.3 -0.1 0.2 1.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.3 0.5 0.1 0.7
auxotrophy Dropout Complete 0.2 -0.1 0.2 1.7 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2 0.4 1.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.3 0.2 0.8 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.1 0.1 1.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.1 0.2 1.7 -0.5
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