Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1260882 to 1262989 12429 mRNA_4062: 12430 - HMMPfam-Protein of unknown function (DUF1115)-PF06544, at 1263570 to 1264744 12430 mRNA_4063: 12431 - K10777 LIG4, DNL4 DNA ligase 4, at 1264892 to 1269621 12431 mRNA_4064: 12432 - HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833, at 1269727 to 1270597 12432 mRNA_4065: 12433 - KOG1198 Zinc-binding oxidoreductase, at 1270736 to 1272325 12433
Group Condition mRNA_4061 mRNA_4062 mRNA_4063 mRNA_4064 mRNA_4065
12429
12430
12431
12432
12433
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.0 -0.4 0.2 -1.7
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.1 0.2 0.8 -1.7
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 -0.3 0.7 -0.5
growth on ypd YPD 0.1 0.3 0.6 0.1 -1.5
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.0 0.0 0.1 -0.8
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.1 0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 0.3 0.5 0.1
growth on oleic acid YNB Glucose -0.1 0.0 0.2 0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 -0.1 0.8 -0.2
growth on oleic acid YNB Oleic Acid 0.1 0.4 0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.3 0.2 0.3 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.4 0.4 -0.2 0.3
growth on ricinoleic acid YNB Glucose 0.4 0.1 0.3 -0.1 0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 0.4 -0.1 0.1 1.1
auxotrophy YNB Glucose -0.1 0.3 -0.1 0.2 1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.2 0.1 0.1 1.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.6 0.2 -0.5 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.0 0.3 0.2 0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.1 0.2 0.4 1.1
auxotrophy Dropout Complete -0.1 0.2 -0.1 0.2 1.7
auxotrophy YNB Glucose 75mM Methionine 0.0 0.4 -0.1 0.2 1.7
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