Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4060: 12428 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 1257194 to 1260711 12428 mRNA_4061: 12429 - SUPERFAMILY--SSF52540, at 1260882 to 1262989 12429 mRNA_4062: 12430 - HMMPfam-Protein of unknown function (DUF1115)-PF06544, at 1263570 to 1264744 12430 mRNA_4063: 12431 - K10777 LIG4, DNL4 DNA ligase 4, at 1264892 to 1269621 12431 mRNA_4064: 12432 - HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833, at 1269727 to 1270597 12432
Group Condition mRNA_4060 mRNA_4061 mRNA_4062 mRNA_4063 mRNA_4064
12428
12429
12430
12431
12432
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 -0.0 -0.1 0.3 0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 0.0 -0.4 0.2
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.0 -0.2 -0.3 0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.7 0.3 0.0 0.0 0.1
growth on oleic acid YNB Glucose -0.3 -0.1 0.0 0.2 0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 0.0 0.4 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 0.4 -0.1 0.1
auxotrophy Dropout Complete 0.0 -0.1 0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 0.2 0.1 0.1
auxotrophy YNB Glucose 0.3 -0.1 0.3 -0.1 0.2
growth on ypd YPD -0.1 0.1 0.3 0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.7 0.1 0.1 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 0.1 -0.1 0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.0 -0.1 0.2 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.0 0.2 -0.3 0.2 0.3
growth on ricinoleic acid YNB Glucose 0.8 0.4 0.1 0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.2 -0.1 0.2 0.8
growth on oleic acid YNB Oleic Acid 1.0 0.1 0.4 0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.0 0.2 0.0 0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 1.2 0.3 0.6 0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 1.5 0.4 0.4 0.4 -0.2
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