Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4049: 12417 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1236078 to 1237368 12417 mRNA_4050: 12418 - K02885 RP-L19e, RPL19 large subunit ribosomal protein L19e, at 1239655 to 1240764 12418 mRNA_4051: 12419 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 1242225 to 1242676 12419 mRNA_4052: 12420 - HMMPfam-Transcription factor Opi1-PF08618, at 1243077 to 1245269 12420 mRNA_4053: 12421 - K00602 purH phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase, at 1245651 to 1248069 12421
Group Condition mRNA_4049 mRNA_4050 mRNA_4051 mRNA_4052 mRNA_4053
12417
12418
12419
12420
12421
facs on lipid accumulation Sorted High BODIPY Gate -0.6   -1.0 -1.0  
ypd buoyancy 40 hrs No Buoyancy Separation -2.6   0.4 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -1.2 -0.5  
growth on ypd YPD -0.3   -0.6 -0.0  
ypd buoyancy 40 hrs High Buoyancy -0.3   -0.3 -0.0  
growth on oleic acid YNB Oleic Acid 0.1   -0.3 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.6 -0.9  
growth on ricinoleic acid YNB Ricinoleic Acid 0.8   -0.3 -0.5  
ypd buoyancy 40 hrs Low Buoyancy 0.1   0.1 -0.2  
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.0 0.1  
auxotrophy Dropout Complete -0.2   0.4 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   0.5 -0.2  
growth on oleic acid YNB Glucose 0.4   0.1 0.2  
auxotrophy YNB Glucose 75mM Arginine 0.2   0.4 0.2  
growth on ricinoleic acid YNB Glucose 0.5   0.5 0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.4   0.4 0.3  
auxotrophy YNB Glucose 0.5   0.3 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   0.3 0.9  
auxotrophy YNB Glucose 75mM Methionine 0.9   -0.0 0.7  
facs on lipid accumulation Sorted Low BODIPY Gate -1.3   0.3 2.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   1.0 0.9  
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