Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4037: 12405 - K12232 HECTD2 E3 ubiquitin-protein ligase HECTD2, at 1210152 to 1214937 12405 mRNA_4038: 12406 - K10772 APEX2 AP endonuclease 2, at 1215030 to 1217455 12406 mRNA_4039: 12407 - K00825 AADAT, KAT2 kynurenine/2-aminoadipate aminotransferase, at 1217761 to 1219740 12407 mRNA_4040: 12408 - K06997 yggS, PROSC PLP dependent protein, at 1219882 to 1220973 12408 mRNA_4041: 12409 - HMMPfam-Sds3-like-PF08598, at 1221368 to 1222599 12409
Group Condition mRNA_4037 mRNA_4038 mRNA_4039 mRNA_4040 mRNA_4041
12405
12406
12407
12408
12409
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.5 -0.3 -0.4 -4.6
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.0 -0.2 -0.2 -3.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.2 -0.3 -0.3 -2.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.0 -0.3 -2.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 -0.3 -0.2 -2.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1 0.1 -0.0 -1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2 0.1 -0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.4 -0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.2 -0.8 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.4 -0.2 -0.9 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 -0.1 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 0.5 -0.0 -0.4
growth on ypd YPD -0.0 0.2 1.1 0.2 -1.1
auxotrophy YNB Glucose 0.1 -0.0 0.1 0.1 0.2
growth on ricinoleic acid YNB Glucose 0.3 -0.0 -0.2 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.2 -0.7 0.1 1.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 -0.0 -0.3 1.0
auxotrophy Dropout Complete 0.3 0.3 0.3 0.0 0.0
growth on oleic acid YNB Oleic Acid 0.3 -0.2 0.3 0.1 0.7
growth on oleic acid YNB Glucose 0.3 -0.2 0.3 0.0 1.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2 -0.1 -0.0 1.2
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