Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4033: 12401 - K17675 SUPV3L1, SUV3 ATP-dependent RNA helicase SUPV3L1/SUV3, at 1200783 to 1202735 12401 mRNA_4034: 12402 - K13181 DDX27, DRS1 ATP-dependent RNA helicase DDX27, at 1204486 to 1207026 12402 mRNA_4035: 12403 - Hypothetical Protein, at 1207830 to 1209196 12403 mRNA_4036: 12404 - Hypothetical Protein, at 1209337 to 1209939 12404 mRNA_4037: 12405 - K12232 HECTD2 E3 ubiquitin-protein ligase HECTD2, at 1210152 to 1214937 12405
Group Condition mRNA_4033 mRNA_4034 mRNA_4035 mRNA_4036 mRNA_4037
12401
12402
12403
12404
12405
growth on ricinoleic acid YNB Ricinoleic Acid       -1.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate       -0.7 -0.1
auxotrophy YNB Glucose       -0.8 0.1
growth on ricinoleic acid YNB Glucose       -0.9 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid       -0.7 0.1
facs on lipid accumulation Sorted No BODIPY Gate       -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine       -0.5 0.1
growth on oleic acid YNB Glucose       -0.7 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy       -0.3 -0.1
growth on ypd YPD       -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine       -0.5 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy       -0.3 -0.1
growth on oleic acid YNB Oleic Acid       -0.6 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy       -0.4 0.3
auxotrophy Dropout Complete       -0.4 0.3
ypd buoyancy 40 hrs No Buoyancy Separation       0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate       -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy       -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy       -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy       0.3 0.2
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