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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4021: 12389 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1178215 to 1180562
12389
mRNA_4022: 12390 - KOG2661 Peptidase family M48, at 1180594 to 1181890
12390
mRNA_4023: 12391 - K01061 E3.1.1.45 carboxymethylenebutenolidase, at 1182056 to 1183388
12391
mRNA_4024: 12392 - HMMPfam-Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)-PF10453,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1183513 to 1185147
12392
mRNA_4025: 12393 - K15634 gpmB probable phosphoglycerate mutase, at 1185909 to 1186748
12393
Group
Condition
mRNA_4021
mRNA_4022
mRNA_4023
mRNA_4024
mRNA_4025
12389
12390
12391
12392
12393
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-2.2
-0.5
0.3
growth on ricinoleic acid
YNB Glucose
-0.2
-0.3
-0.6
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.9
-0.2
-0.3
auxotrophy
Dropout Complete
-0.2
0.0
-1.5
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-1.0
-0.3
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-1.5
-0.0
0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.8
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
-0.4
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.2
-1.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.2
-0.4
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.5
-0.1
-0.1
auxotrophy
YNB Glucose
0.2
0.2
-1.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-1.1
-0.1
0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-1.0
-0.1
0.5
growth on ypd
YPD
-0.0
0.0
-0.7
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.7
0.3
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.2
0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.0
0.4
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.1
0.3
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
1.0
0.8
0.1
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