Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4021: 12389 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1178215 to 1180562 12389 mRNA_4022: 12390 - KOG2661 Peptidase family M48, at 1180594 to 1181890 12390 mRNA_4023: 12391 - K01061 E3.1.1.45 carboxymethylenebutenolidase, at 1182056 to 1183388 12391 mRNA_4024: 12392 - HMMPfam-Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1)-PF10453,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1183513 to 1185147 12392 mRNA_4025: 12393 - K15634 gpmB probable phosphoglycerate mutase, at 1185909 to 1186748 12393
Group Condition mRNA_4021 mRNA_4022 mRNA_4023 mRNA_4024 mRNA_4025
12389
12390
12391
12392
12393
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -2.2 -0.5   0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.3 -0.6   -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.9 -0.2   -0.3
auxotrophy Dropout Complete -0.2 0.0 -1.5   0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -1.0 -0.3   0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -1.5 -0.0   0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.8 -0.2   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 -0.4   0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 0.2 -1.0   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 -0.4   -0.3
growth on oleic acid YNB Glucose -0.1 -0.5 -0.1   -0.1
auxotrophy YNB Glucose 0.2 0.2 -1.0   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -1.1 -0.1   0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 -0.6   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -1.0 -0.1   0.5
growth on ypd YPD -0.0 0.0 -0.7   0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.7 0.3   0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2 0.2   -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.0 0.4   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.1 0.3   0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 1.0 0.8   0.1
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