Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4017: 12385 - K13333 PLB lysophospholipase, at 1168260 to 1170390 12385 mRNA_4018: 12386 - K09500 CCT8 T-complex protein 1 subunit theta, at 1170619 to 1173012 12386 mRNA_4019: 12387 - K15116 SLC25A33_36, RIM2 solute carrier family 25, member 33/36, at 1173256 to 1174830 12387 mRNA_4020: 12388 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1175371 to 1177863 12388 mRNA_4021: 12389 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1178215 to 1180562 12389
Group Condition mRNA_4017 mRNA_4018 mRNA_4019 mRNA_4020 mRNA_4021
12385
12386
12387
12388
12389
growth on ricinoleic acid YNB Glucose -0.1     -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1     -0.2 -0.3
growth on oleic acid YNB Glucose -0.3     0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0     -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0     -0.1 0.1
auxotrophy Dropout Complete 0.0     0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1     0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2     0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5     0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.3     0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0     0.0 0.0
auxotrophy YNB Glucose -0.1     -0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.1     -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1     0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.0     0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1     0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0     0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     0.1 -0.1
growth on ypd YPD 0.4     0.1 -0.0
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