Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1133931 to 1136432 12375 mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1136733 to 1139810 12376 mRNA_4009: 12377 - K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1, at 1140211 to 1141922 12377 mRNA_4010: 12378 - HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SMART-Leucine-rich repeat - CC (cysteine-containing) subfamily-SM00367,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 1142539 to 1145554 12378 mRNA_4011: 12379 - HMMPfam-Retinoic acid induced 16-like protein-PF10257, at 1145939 to 1149704 12379
Group Condition mRNA_4007 mRNA_4008 mRNA_4009 mRNA_4010 mRNA_4011
12375
12376
12377
12378
12379
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.2 -0.5 -0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 -0.9 -0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.5 -0.9 -0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1 -0.7 0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -1.0 0.5 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -1.1 0.2 0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 -0.7 0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 0.1 0.1 -0.1
auxotrophy Dropout Complete 0.1 -0.0 0.3 -0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 0.0 0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.0 -0.5 0.8 0.3
growth on oleic acid YNB Oleic Acid 0.3 -0.0 -0.0 -0.1 -0.0
auxotrophy YNB Glucose 0.0 -0.1 0.4 -0.3 0.1
growth on ricinoleic acid YNB Glucose 0.4 -0.1 0.1 -0.1 -0.2
growth on oleic acid YNB Glucose 0.2 -0.1 0.0 0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.4 -0.3 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.0 0.2 0.5 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 1.1 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.8 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 1.1 -0.2 -0.2
growth on ypd YPD 0.1 -0.1 1.0 0.0 0.4
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