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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1131746 to 1132749
12373
mRNA_4006: 12374 - Hypothetical Protein, at 1133171 to 1133679
12374
mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1133931 to 1136432
12375
mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1136733 to 1139810
12376
mRNA_4009: 12377 - K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1, at 1140211 to 1141922
12377
Group
Condition
mRNA_4005
mRNA_4006
mRNA_4007
mRNA_4008
mRNA_4009
12373
12374
12375
12376
12377
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.4
-0.7
0.0
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-1.0
0.1
-0.2
-0.1
-1.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.0
-0.0
-0.1
-1.1
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.2
-0.1
-0.0
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.1
-0.0
0.1
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.1
0.3
-0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.2
0.3
-0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
1.1
0.1
-0.4
0.5
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.0
-0.1
-0.1
-0.3
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.1
0.0
0.0
0.1
growth on oleic acid
YNB Glucose
0.5
0.2
0.2
-0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.1
0.0
0.4
-0.3
auxotrophy
YNB Glucose
0.6
0.1
0.0
-0.1
0.4
growth on ricinoleic acid
YNB Glucose
0.5
0.2
0.4
-0.1
0.1
auxotrophy
Dropout Complete
0.6
0.3
0.1
-0.0
0.3
growth on ypd
YPD
0.2
0.1
0.1
-0.1
1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.0
-0.2
-0.1
1.1
growth on oleic acid
YNB Oleic Acid
1.2
0.2
0.3
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.3
0.1
-0.1
0.8
auxotrophy
YNB Glucose 75mM Arginine
1.0
0.2
0.0
0.2
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.2
-0.1
0.1
0.1
1.1
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