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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1126968 to 1131164
12372
mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1131746 to 1132749
12373
mRNA_4006: 12374 - Hypothetical Protein, at 1133171 to 1133679
12374
mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1133931 to 1136432
12375
mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1136733 to 1139810
12376
Group
Condition
mRNA_4004
mRNA_4005
mRNA_4006
mRNA_4007
mRNA_4008
12372
12373
12374
12375
12376
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.7
-0.4
-0.7
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.4
0.6
0.2
0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-1.0
0.1
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.5
0.1
-0.0
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.4
0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.2
0.6
0.1
0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
0.0
-0.0
-0.1
growth on ypd
YPD
-0.3
0.2
0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
1.0
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.6
0.0
-0.2
-0.1
auxotrophy
YNB Glucose
-0.4
0.6
0.1
0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
1.1
0.1
-0.4
0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.4
0.1
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
1.2
-0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.6
0.3
0.1
-0.1
growth on oleic acid
YNB Glucose
-0.1
0.5
0.2
0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
0.5
0.2
0.4
-0.1
auxotrophy
Dropout Complete
-0.1
0.6
0.3
0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.5
0.1
0.0
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.4
1.0
0.2
0.0
0.2
growth on oleic acid
YNB Oleic Acid
-0.6
1.2
0.2
0.3
-0.0
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