Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_4004: 12372 - KOG1341 Na+/K+ transporter, at 1126968 to 1131164 12372 mRNA_4005: 12373 - HMMPfam-bZIP transcription factor-PF00170,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1131746 to 1132749 12373 mRNA_4006: 12374 - Hypothetical Protein, at 1133171 to 1133679 12374 mRNA_4007: 12375 - K12373 HEXA_B hexosaminidase, at 1133931 to 1136432 12375 mRNA_4008: 12376 - K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB, at 1136733 to 1139810 12376
Group Condition mRNA_4004 mRNA_4005 mRNA_4006 mRNA_4007 mRNA_4008
12372
12373
12374
12375
12376
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.7 -0.4 -0.7 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -2.4 0.6 0.2 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -1.0 0.1 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.5 0.1 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.4 0.2 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.2 0.6 0.1 0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 0.0 -0.0 -0.1
growth on ypd YPD -0.3 0.2 0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 1.0 -0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.6 0.0 -0.2 -0.1
auxotrophy YNB Glucose -0.4 0.6 0.1 0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 1.1 0.1 -0.4 0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 0.4 0.1 0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 1.2 -0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.6 0.3 0.1 -0.1
growth on oleic acid YNB Glucose -0.1 0.5 0.2 0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.3 0.5 0.2 0.4 -0.1
auxotrophy Dropout Complete -0.1 0.6 0.3 0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.5 0.1 0.0 0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 1.0 0.2 0.0 0.2
growth on oleic acid YNB Oleic Acid -0.6 1.2 0.2 0.3 -0.0
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