Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3990: 12358 - K07561 DPH1, dph2 2-(3-amino-3-carboxypropyl)histidine synthase, at 1087567 to 1089527 12358 mRNA_3991: 12359 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1089725 to 1094754 12359 mRNA_3992: 12360 - KOG0627 Heat shock transcription factor, at 1095676 to 1096761 12360 mRNA_3993: 12361 - KOG0627 Heat shock transcription factor, at 1098297 to 1099754 12361 mRNA_3994: 12362 - K11484 HOS3 histone deacetylase HOS3, at 1100356 to 1102987 12362
Group Condition mRNA_3990 mRNA_3991 mRNA_3992 mRNA_3993 mRNA_3994
12358
12359
12360
12361
12362
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.0 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 -0.5 -0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.7 0.1 0.0 0.2 -0.1
growth on oleic acid YNB Glucose -0.6 0.2 0.1 0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.3 0.1 0.3 0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.1 0.1 0.4 -0.5
growth on ypd YPD -0.5 0.4 0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.1 0.3 0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 0.4 0.3 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 0.1 0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.1 -0.3 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.0 0.0 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 0.1 -0.1 -0.1
auxotrophy Dropout Complete 0.3 0.4 -0.3 0.2 -0.5
growth on oleic acid YNB Oleic Acid -0.2 0.2 0.0 0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 -0.1 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.0 -0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.6 -0.7 0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.3 0.1 0.0 0.0
auxotrophy YNB Glucose 0.6 0.3 -0.1 0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3 0.0 0.6 -0.0
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