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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3984: 12352 - Hypothetical Protein, at 1073913 to 1075521
12352
mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1076249 to 1078580
12353
mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1078866 to 1080824
12354
mRNA_3987: 12355 - K08576 CAPN7 calpain-7, at 1081981 to 1082833
12355
mRNA_3988: 12356 - Hypothetical Protein, at 1084806 to 1085290
12356
Group
Condition
mRNA_3984
mRNA_3985
mRNA_3986
mRNA_3987
mRNA_3988
12352
12353
12354
12355
12356
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.6
-1.2
-1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.1
-1.3
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.4
0.4
-2.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.1
-0.3
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.0
0.1
-1.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
1.1
-0.1
-2.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.7
0.7
-1.9
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
0.8
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.3
-0.3
0.1
growth on oleic acid
YNB Glucose
-0.2
-0.1
0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
-0.9
0.4
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.4
1.3
-1.0
growth on ypd
YPD
0.1
-0.1
0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.4
0.2
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
0.2
0.6
growth on ricinoleic acid
YNB Glucose
-0.0
0.3
1.1
0.7
auxotrophy
Dropout Complete
-0.2
-0.4
1.0
1.8
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.2
0.7
2.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.1
0.9
1.9
auxotrophy
YNB Glucose
-0.2
-0.1
0.6
2.4
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