Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1059957 to 1071266 12350 mRNA_3983: 12351 - HMMPfam-Mpv17 / PMP22 family-PF04117, at 1071733 to 1072892 12351 mRNA_3984: 12352 - Hypothetical Protein, at 1073913 to 1075521 12352 mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1076249 to 1078580 12353 mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1078866 to 1080824 12354
Group Condition mRNA_3982 mRNA_3983 mRNA_3984 mRNA_3985 mRNA_3986
12350
12351
12352
12353
12354
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 -0.3   -0.6
growth on oleic acid YNB Glucose   -0.4 -0.2   -0.1
auxotrophy YNB Glucose 75mM Arginine   -0.5 -0.3   0.1
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.3   -0.2
growth on ypd YPD   -0.5 0.1   -0.1
auxotrophy Dropout Complete   -0.0 -0.2   -0.4
auxotrophy YNB Glucose   -0.3 -0.2   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.2 -0.6   -0.1
growth on oleic acid YNB Oleic Acid   -0.1 -0.1   -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 -0.3   0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 0.6   -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3 -0.1   0.3
facs on lipid accumulation Sorted No BODIPY Gate   0.3 -0.3   -0.0
ypd buoyancy 40 hrs Low Buoyancy   0.3 -0.4   0.1
ypd buoyancy 40 hrs Median Buoyancy   0.2 -0.1   0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 0.1   -0.4
growth on ricinoleic acid YNB Glucose   0.1 -0.0   0.3
facs on lipid accumulation Sorted High BODIPY Gate   0.4 -0.4   0.4
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 -0.2   1.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 -0.3   0.7
ypd buoyancy 40 hrs High Buoyancy   0.4 -0.1   0.3
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