Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1056384 to 1057964 12348 mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1058258 to 1059791 12349 mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1059957 to 1071266 12350 mRNA_3983: 12351 - HMMPfam-Mpv17 / PMP22 family-PF04117, at 1071733 to 1072892 12351 mRNA_3984: 12352 - Hypothetical Protein, at 1073913 to 1075521 12352
Group Condition mRNA_3980 mRNA_3981 mRNA_3982 mRNA_3983 mRNA_3984
12348
12349
12350
12351
12352
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.4   -0.3 -0.3
growth on oleic acid YNB Glucose -0.6 -0.4   -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -1.1   -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.6   -0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.4   -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.5   0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.0   -0.2 -0.3
auxotrophy YNB Glucose 0.1 -0.6   -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.4   -0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.2   0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.5 0.0   -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3   0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.4   0.2 -0.1
auxotrophy Dropout Complete -0.1 -0.0   -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.1   0.2 -0.6
growth on ypd YPD 0.4 0.0   -0.5 0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0   0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.3   0.1 0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.7   0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 1.0   0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.8   0.4 -0.4
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