Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3978: 12346 - Hypothetical Protein, at 1053030 to 1054389 12346 mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1054743 to 1056048 12347 mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1056384 to 1057964 12348 mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1058258 to 1059791 12349 mRNA_3982: 12350 - K19525 VPS13A_C vacuolar protein sorting-associated protein 13A/C, at 1059957 to 1071266 12350
Group Condition mRNA_3978 mRNA_3979 mRNA_3980 mRNA_3981 mRNA_3982
12346
12347
12348
12349
12350
ypd buoyancy 40 hrs No Buoyancy Separation -0.8   0.2 -1.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5   -0.9 -0.4  
growth on oleic acid YNB Glucose 0.1   -0.6 -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.5 -0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5   -0.6 -0.5  
growth on oleic acid YNB Oleic Acid -0.1   -0.5 0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.1 -0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.6 0.0  
growth on ricinoleic acid YNB Glucose 0.5   -0.5 -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.0   -0.1 -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.2   -0.1 -0.3  
auxotrophy YNB Glucose 75mM Arginine 0.5   0.0 -0.6  
auxotrophy YNB Glucose 75mM Methionine 0.4   0.0 -0.4  
growth on ypd YPD -0.4   0.4 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.4 0.3  
auxotrophy YNB Glucose 0.7   0.1 -0.6  
auxotrophy Dropout Complete 0.4   -0.1 -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.2 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -0.4 0.7  
facs on lipid accumulation Sorted High BODIPY Gate -0.4   0.4 0.8  
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.0 1.0  
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