Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1051198 to 1052896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1053030 to 1054389 12346 mRNA_3979: 12347 - K07119 K07119 uncharacterized protein, at 1054743 to 1056048 12347 mRNA_3980: 12348 - KOG1196 Predicted NAD-dependent oxidoreductase, at 1056384 to 1057964 12348 mRNA_3981: 12349 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 1058258 to 1059791 12349
Group Condition mRNA_3977 mRNA_3978 mRNA_3979 mRNA_3980 mRNA_3981
12345
12346
12347
12348
12349
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.8   0.2 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1   -0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.5   -0.9 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.2   -0.6 0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1   -0.5 0.0
growth on oleic acid YNB Glucose 0.2 0.1   -0.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1   -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.5   -0.6 -0.5
growth on ricinoleic acid YNB Glucose 0.1 0.5   -0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.2   -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1   -0.4 0.3
growth on ypd YPD -0.0 -0.4   0.4 0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 0.4   0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.0   -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 0.5   0.0 -0.6
auxotrophy Dropout Complete -0.1 0.4   -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.2   -0.4 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.3   0.2 -0.1
auxotrophy YNB Glucose 0.1 0.7   0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.4   0.4 0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1   -0.0 1.0
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