Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3974: 12342 - K02350 POLZ1, rev3 DNA polymerase zeta, at 1033703 to 1040837 12342 mRNA_3975: 12343 - KOG1938 Protein with predicted involvement in meiosis (GSG1), at 1041563 to 1046675 12343 mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1047076 to 1050963 12344 mRNA_3977: 12345 - KOG4689 Predicted RNase, at 1051198 to 1052896 12345 mRNA_3978: 12346 - Hypothetical Protein, at 1053030 to 1054389 12346
Group Condition mRNA_3974 mRNA_3975 mRNA_3976 mRNA_3977 mRNA_3978
12342
12343
12344
12345
12346
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.0   -0.1 0.1
growth on ypd YPD -0.3 0.6   -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1   -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1   0.4 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.5   0.2 -0.8
growth on oleic acid YNB Glucose -0.1 -0.1   0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1   -0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.3   -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.0   0.2 0.1
growth on oleic acid YNB Oleic Acid -0.1 0.9   -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.5   0.2 -0.0
growth on ricinoleic acid YNB Glucose 0.1 0.3   0.1 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.9   -0.2 0.2
auxotrophy Dropout Complete 0.1 0.6   -0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.7   -0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.8   -0.1 0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 0.6   0.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.6   0.2 0.5
auxotrophy YNB Glucose 0.0 0.6   0.1 0.7
auxotrophy YNB Glucose 75mM Arginine 0.2 0.6   0.2 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.6   0.5 0.5
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