Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3972: 12340 - K11594 DDX3X, bel ATP-dependent RNA helicase DDX3X, at 1029366 to 1031642 12340 mRNA_3973: 12341 - HMMPfam-Flavin reductase like domain-PF01613,SMART-Flavin reductase like domain-SM00903,SUPERFAMILY--SSF50475, at 1032513 to 1033671 12341 mRNA_3974: 12342 - K02350 POLZ1, rev3 DNA polymerase zeta, at 1033703 to 1040837 12342 mRNA_3975: 12343 - KOG1938 Protein with predicted involvement in meiosis (GSG1), at 1041563 to 1046675 12343 mRNA_3976: 12344 - K20473 NBAS neuroblastoma-amplified sequence, at 1047076 to 1050963 12344
Group Condition mRNA_3972 mRNA_3973 mRNA_3974 mRNA_3975 mRNA_3976
12340
12341
12342
12343
12344
facs on lipid accumulation Sorted Low BODIPY Gate   -0.7 0.0 0.3  
ypd buoyancy 40 hrs Low Buoyancy   -0.3 -0.1 0.1  
growth on oleic acid YNB Glucose   -0.0 -0.1 -0.1  
ypd buoyancy 40 hrs Median Buoyancy   -0.2 -0.2 0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2 -0.3 0.0  
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 0.2 -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.7 0.1 0.7  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.5 0.3 0.5  
facs on lipid accumulation Sorted High BODIPY Gate   0.3 0.1 -0.1  
growth on ypd YPD   0.1 -0.3 0.6  
growth on ricinoleic acid YNB Glucose   0.1 0.1 0.3  
ypd buoyancy 40 hrs High Buoyancy   -0.1 0.1 0.5  
auxotrophy Dropout Complete   -0.0 0.1 0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0 0.1 0.6  
growth on oleic acid YNB Oleic Acid   -0.1 -0.1 0.9  
auxotrophy YNB Glucose   0.2 0.0 0.6  
auxotrophy YNB Glucose 75mM Methionine   0.1 0.2 0.6  
auxotrophy YNB Glucose 75mM Arginine   0.1 0.2 0.6  
growth on ricinoleic acid YNB Ricinoleic Acid   0.5 0.1 0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6 -0.1 0.9  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.7 -0.0 0.8  
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