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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3969: 12337 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 1025605 to 1026362
12337
mRNA_3970: 12338 - Hypothetical Protein, at 1026550 to 1027191
12338
mRNA_3971: 12339 - K02964 RP-S18e, RPS18 small subunit ribosomal protein S18e, at 1027853 to 1028767
12339
mRNA_3972: 12340 - K11594 DDX3X, bel ATP-dependent RNA helicase DDX3X, at 1029366 to 1031642
12340
mRNA_3973: 12341 - HMMPfam-Flavin reductase like domain-PF01613,SMART-Flavin reductase like domain-SM00903,SUPERFAMILY--SSF50475, at 1032513 to 1033671
12341
Group
Condition
mRNA_3969
mRNA_3970
mRNA_3971
mRNA_3972
mRNA_3973
12337
12338
12339
12340
12341
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.1
-0.7
auxotrophy
Dropout Complete
-0.6
-0.6
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-1.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.3
0.2
growth on ypd
YPD
-0.4
-0.2
0.1
auxotrophy
YNB Glucose
-0.7
0.0
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.5
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.8
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.4
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.5
-0.6
0.1
growth on oleic acid
YNB Glucose
0.4
-0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.6
0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.5
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.3
0.5
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