Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3962: 12330 - K09647 IMP1 mitochondrial inner membrane protease subunit 1, at 1012069 to 1012859 12330 mRNA_3963: 12331 - HMMPfam-Domain of unknown function (DUF4504)-PF14953, at 1012927 to 1013924 12331 mRNA_3964: 12332 - Hypothetical Protein, at 1014027 to 1014928 12332 mRNA_3965: 12333 - Hypothetical Protein, at 1015715 to 1016506 12333 mRNA_3966: 12334 - KOG2157 Predicted tubulin-tyrosine ligase, at 1016759 to 1018391 12334
Group Condition mRNA_3962 mRNA_3963 mRNA_3964 mRNA_3965 mRNA_3966
12330
12331
12332
12333
12334
facs on lipid accumulation Sorted Low BODIPY Gate   -1.1 0.1 -0.3 0.0
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 -0.1 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.2 0.1 -0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.2 -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 0.1 -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy   0.1 0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -0.4 0.3 -0.3 0.4
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.0 -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.5 0.5 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.4 0.3 -0.2 0.3
growth on ricinoleic acid YNB Glucose   -0.1 0.4 -0.3 -0.0
growth on oleic acid YNB Glucose   -0.0 -0.0 -0.0 0.1
auxotrophy YNB Glucose   -0.2 0.2 -0.1 0.1
growth on oleic acid YNB Oleic Acid   -0.3 0.2 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine   0.1 0.1 -0.2 0.1
growth on ypd YPD   0.1 0.1 0.0 0.0
auxotrophy Dropout Complete   -0.2 0.3 0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.4 0.1 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.3 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine   0.3 0.3 0.2 0.2
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