Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3960: 12328 - K14284 NXF, TAP, MEX67 nuclear RNA export factor, at 1004680 to 1007202 12328 mRNA_3961: 12329 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1008252 to 1011828 12329 mRNA_3962: 12330 - K09647 IMP1 mitochondrial inner membrane protease subunit 1, at 1012069 to 1012859 12330 mRNA_3963: 12331 - HMMPfam-Domain of unknown function (DUF4504)-PF14953, at 1012927 to 1013924 12331 mRNA_3964: 12332 - Hypothetical Protein, at 1014027 to 1014928 12332
Group Condition mRNA_3960 mRNA_3961 mRNA_3962 mRNA_3963 mRNA_3964
12328
12329
12330
12331
12332
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2   -1.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.8   -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.1   0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.4   0.1 0.0
ypd buoyancy 40 hrs High Buoyancy   0.0   -0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.7   0.3 0.3
auxotrophy YNB Glucose   -0.1   -0.2 0.2
auxotrophy Dropout Complete   -0.2   -0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1   -0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate   -0.3   0.2 0.1
auxotrophy YNB Glucose 75mM Methionine   -0.2   0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1   -0.4 0.3
growth on ypd YPD   -0.1   0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.4   -0.2 -0.1
growth on oleic acid YNB Oleic Acid   0.3   -0.3 0.2
growth on oleic acid YNB Glucose   0.3   -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   0.5   -0.5 0.5
growth on ricinoleic acid YNB Glucose   0.1   -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine   -0.0   0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid   0.8   -0.4 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2   0.4 0.1
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