Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948000 to 949684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950019 to 951719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952149 to 952942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953111 to 953710 12309 mRNA_3942: 12310 - K20298 VPS52 vacuolar protein sorting-associated protein 52, at 954085 to 956912 12310
Group Condition mRNA_3938 mRNA_3939 mRNA_3940 mRNA_3941 mRNA_3942
12306
12307
12308
12309
12310
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.1     -0.9
auxotrophy YNB Glucose -0.3 -0.4     -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.4     0.1
auxotrophy Dropout Complete -0.5 0.1     -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3     -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1     -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1     0.0
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0     0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1     -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5     0.6
auxotrophy YNB Glucose 75mM Arginine -0.4 0.2     0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.3     0.2
growth on oleic acid YNB Glucose -0.1 -0.4     0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.4     0.4
growth on ypd YPD -0.4 0.1     0.6
growth on ricinoleic acid YNB Glucose -0.5 -0.3     1.0
growth on oleic acid YNB Oleic Acid -0.1 -0.3     0.8
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2     0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.6     -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.0     0.5
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.4     0.3
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