Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3937: 12305 - KOG0692 Pentafunctional AROM protein, at 946371 to 947832 12305 mRNA_3938: 12306 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 948000 to 949684 12306 mRNA_3939: 12307 - K13954 yiaY alcohol dehydrogenase, at 950019 to 951719 12307 mRNA_3940: 12308 - KOG3162 Mitochondrial/chloroplast ribosomal protein S18, at 952149 to 952942 12308 mRNA_3941: 12309 - Hypothetical Protein, at 953111 to 953710 12309
Group Condition mRNA_3937 mRNA_3938 mRNA_3939 mRNA_3940 mRNA_3941
12305
12306
12307
12308
12309
growth on ricinoleic acid YNB Glucose 0.0 -0.5 -0.3    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.1 -0.3    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 -0.5    
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 -0.0    
auxotrophy YNB Glucose 0.1 -0.3 -0.4    
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.4 -0.4    
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.3    
auxotrophy Dropout Complete -0.2 -0.5 0.1    
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.1    
growth on oleic acid YNB Glucose 0.0 -0.1 -0.4    
growth on oleic acid YNB Oleic Acid 0.1 -0.1 -0.3    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 -0.4    
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.3 0.1    
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.2 0.0    
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.0 0.1    
growth on ypd YPD 0.6 -0.4 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 0.1    
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0 0.4    
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.4 0.6    
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