Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3931: 12299 - BLAST protein [Lichtheimia corymbifera JMRC-FSU-9682], at 931506 to 935642 12299 mRNA_3932: 12300 - K18532 AK6, FAP7 adenylate kinase, at 935952 to 936713 12300 mRNA_3933: 12301 - Hypothetical Protein, at 936850 to 939133 12301 mRNA_3934: 12302 - K01955 carB, CPA2 carbamoyl-phosphate synthase large subunit, at 940362 to 944260 12302 mRNA_3935: 12303 - HMMPfam-ER protein Pkr1-PF08636, at 944779 to 945196 12303
Group Condition mRNA_3931 mRNA_3932 mRNA_3933 mRNA_3934 mRNA_3935
12299
12300
12301
12302
12303
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.0 -5.1 -0.3
auxotrophy YNB Glucose 0.5   0.5 -5.3 -0.7
growth on oleic acid YNB Glucose 0.3   -0.4 -4.8 -0.1
growth on ricinoleic acid YNB Glucose 0.4   0.1 -5.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.3   0.6 -5.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.7   -0.2 -4.7 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   -0.3 -3.9 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0   0.0 -3.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 1.4   0.2 -5.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 1.6   -0.1 -5.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.2 -4.1 0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.5   0.2 -3.7 0.2
growth on oleic acid YNB Oleic Acid 1.0   -0.1 -3.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.3 -2.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   -0.9 0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3   0.1 -0.1 0.3
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.3 0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.4   0.6 -0.2 -0.2
growth on ypd YPD 0.2   0.7 0.1 0.1
auxotrophy Dropout Complete 0.7   0.4 0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.9   -0.1 -0.3 0.7
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