Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895186 to 897368 12286 mRNA_3919: 12287 - KOG4020 Protein DRE2, required for cell viability, at 897887 to 899209 12287 mRNA_3920: 12288 - K12767 RIM15 serine/threonine-protein kinase RIM15, at 899540 to 908734 12288 mRNA_3921: 12289 - Hypothetical Protein, at 910029 to 911741 12289 mRNA_3922: 12290 - K11099 SNRPG, SMG small nuclear ribonucleoprotein G, at 912184 to 912720 12290
Group Condition mRNA_3918 mRNA_3919 mRNA_3920 mRNA_3921 mRNA_3922
12286
12287
12288
12289
12290
facs on lipid accumulation Sorted High BODIPY Gate -0.9   -1.7 0.3  
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -1.2 -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5   -0.1 -0.8  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   -1.1 -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.4   0.0 -0.8  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   0.0 -0.6  
growth on ypd YPD -0.3   -0.1 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   -0.1 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   -0.4 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.0 -0.3  
auxotrophy YNB Glucose 0.3   0.3 -0.8  
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.1 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   -0.2 -0.1  
auxotrophy YNB Glucose 75mM Methionine 0.5   0.2 -0.6  
growth on ricinoleic acid YNB Glucose 0.2   0.1 -0.3  
auxotrophy YNB Glucose 75mM Arginine 0.4   0.2 -0.2  
auxotrophy Dropout Complete 0.4   0.3 -0.3  
growth on oleic acid YNB Glucose -0.0   0.0 0.7  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   0.2 0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 0.4   0.3 0.1  
growth on oleic acid YNB Oleic Acid 0.6   0.5 0.5  
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