Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3915: 12283 - K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase, at 890640 to 892402 12283 mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892527 to 893886 12284 mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894031 to 894594 12285 mRNA_3918: 12286 - KOG0024 Sorbitol dehydrogenase, at 895186 to 897368 12286 mRNA_3919: 12287 - KOG4020 Protein DRE2, required for cell viability, at 897887 to 899209 12287
Group Condition mRNA_3915 mRNA_3916 mRNA_3917 mRNA_3918 mRNA_3919
12283
12284
12285
12286
12287
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -1.3 -0.9  
ypd buoyancy 40 hrs High Buoyancy -1.0   0.2 -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   -0.1 -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8   -0.6 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   -0.6 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.5   0.1 -0.1  
growth on ypd YPD 0.7   -0.6 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.0 0.1  
growth on ricinoleic acid YNB Glucose -0.1   -0.2 0.2  
ypd buoyancy 40 hrs No Buoyancy Separation 0.7   -1.0 0.4  
growth on oleic acid YNB Glucose -0.4   0.6 -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.3   0.5 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.6 -0.4  
growth on oleic acid YNB Oleic Acid -0.2   0.2 0.6  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   0.6 0.1  
auxotrophy YNB Glucose 0.1   0.3 0.3  
ypd buoyancy 40 hrs Median Buoyancy -0.0   0.7 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   1.0 0.0  
auxotrophy Dropout Complete -0.4   1.0 0.4  
auxotrophy YNB Glucose 75mM Methionine -0.2   1.2 0.5  
auxotrophy YNB Glucose 75mM Arginine 0.3   1.1 0.4  
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