Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3913: 12281 - SUPERFAMILY--SSF48452, at 885030 to 886525 12281 mRNA_3914: 12282 - HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350, at 886816 to 890417 12282 mRNA_3915: 12283 - K01062 PLA2G7, PAFAH platelet-activating factor acetylhydrolase, at 890640 to 892402 12283 mRNA_3916: 12284 - K02736 PSMB4 20S proteasome subunit beta 7, at 892527 to 893886 12284 mRNA_3917: 12285 - KOG4479 Transcription factor e(y)2, at 894031 to 894594 12285
Group Condition mRNA_3913 mRNA_3914 mRNA_3915 mRNA_3916 mRNA_3917
12281
12282
12283
12284
12285
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -0.8   -0.6
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 0.1   -1.3
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 -0.4   -0.6
ypd buoyancy 40 hrs High Buoyancy   -0.0 -1.0   0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 -0.3   -0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.5   0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -0.3 -0.2   -0.0
growth on ricinoleic acid YNB Glucose   -0.1 -0.1   -0.2
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 0.7   -1.0
growth on oleic acid YNB Oleic Acid   0.0 -0.2   0.2
auxotrophy YNB Glucose   -0.3 0.1   0.3
auxotrophy Dropout Complete   -0.5 -0.4   1.0
ypd buoyancy 40 hrs Low Buoyancy   -0.0 -0.3   0.5
growth on oleic acid YNB Glucose   0.0 -0.4   0.6
growth on ypd YPD   0.2 0.7   -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.1   0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 0.1   0.6
auxotrophy YNB Glucose 75mM Methionine   -0.4 -0.2   1.2
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.0   0.7
auxotrophy YNB Glucose 75mM Arginine   -0.4 0.3   1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 -0.0   1.0
remove
mRNA_3913
plot		 remove
mRNA_3914
plot		 remove
mRNA_3915		 remove
mRNA_3916
plot		 remove
mRNA_3917
plot