Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865746 to 868815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869074 to 869751 12275 mRNA_3908: 12276 - Interpro Protein of unknown function (DUF2945), at 870118 to 872012 12276 mRNA_3909: 12277 - K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1, at 872113 to 873418 12277 mRNA_3910: 12278 - KOG0587 Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases, at 874209 to 878555 12278
Group Condition mRNA_3906 mRNA_3907 mRNA_3908 mRNA_3909 mRNA_3910
12274
12275
12276
12277
12278
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.9 -0.1 -0.1 0.1
growth on oleic acid YNB Oleic Acid -0.3 -1.5 0.0 0.2 -0.1
growth on oleic acid YNB Glucose 0.1 -1.0 -0.1 0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.5 0.0 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.5 -0.0 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.6 -0.1 0.1 -0.4
auxotrophy Dropout Complete -0.1 -0.3 -0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.5 -0.1 0.4 -0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.4 0.2 0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.3 -0.1 -0.2 0.2
auxotrophy YNB Glucose 0.1 -0.5 0.1 0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.7 0.0 0.6 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 0.1 0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.9 0.1 0.7 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 0.0 0.1 0.0
growth on ypd YPD -0.0 0.2 -0.1 0.7 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -1.0 0.1 0.9 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 0.1 0.2 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.9 0.2 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.6 0.1 0.5 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.7 0.2 0.7 0.3
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