Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3905: 12273 - KOG0118 FOG RRM domain, at 862046 to 863996 12273 mRNA_3906: 12274 - K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme, at 865746 to 868815 12274 mRNA_3907: 12275 - Hypothetical Protein, at 869074 to 869751 12275 mRNA_3908: 12276 - Interpro Protein of unknown function (DUF2945), at 870118 to 872012 12276 mRNA_3909: 12277 - K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1, at 872113 to 873418 12277
Group Condition mRNA_3905 mRNA_3906 mRNA_3907 mRNA_3908 mRNA_3909
12273
12274
12275
12276
12277
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -1.9 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 0.3 -0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 0.3 -0.9 0.1 0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.7 0.4 -0.5 -0.0 -0.3
growth on oleic acid YNB Oleic Acid 0.3 -0.3 -1.5 0.0 0.2
growth on oleic acid YNB Glucose -0.2 0.1 -1.0 -0.1 0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 0.3 -0.6 -0.1 0.1
auxotrophy Dropout Complete -0.1 -0.1 -0.3 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.3 -0.4 0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.5 -0.5 0.0 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 -0.5 -0.1 0.4
auxotrophy YNB Glucose -0.2 0.1 -0.5 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.3 0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.0 -0.7 0.0 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.6 0.2 0.1 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.2 0.0 0.1
growth on ypd YPD -0.3 -0.0 0.2 -0.1 0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.5 0.6 0.1 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.1 0.3 -1.0 0.1 0.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.8 -0.4 0.9 0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.5 0.7 0.2 0.7
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