Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852096 to 854470 12269 mRNA_3902: 12270 - K12471 EPN epsin, at 855134 to 857273 12270 mRNA_3903: 12271 - K01273 DPEP membrane dipeptidase, at 857570 to 859111 12271 mRNA_3904: 12272 - KOG1176 Acyl-CoA synthetase, at 859161 to 861426 12272 mRNA_3905: 12273 - KOG0118 FOG RRM domain, at 862046 to 863996 12273
Group Condition mRNA_3901 mRNA_3902 mRNA_3903 mRNA_3904 mRNA_3905
12269
12270
12271
12272
12273
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.3 0.0 -1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.2 0.0 -1.4
growth on oleic acid YNB Glucose -0.6   -0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.1   -0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.2 -0.2 -0.4
auxotrophy YNB Glucose 0.2   -0.4 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.5 0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.3   -0.2 0.2 -0.7
growth on oleic acid YNB Oleic Acid -0.2   -0.2 -0.3 0.3
auxotrophy Dropout Complete 0.1   -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.3 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.2 -0.5 0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.3   -0.3 -0.4 0.8
growth on ypd YPD 0.1   0.0 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2   0.2 0.0 -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -0.2 0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.0   0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.2 -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.2 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   0.4 0.3 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.2 0.1 1.1
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