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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852096 to 854470
12269
mRNA_3902: 12270 - K12471 EPN epsin, at 855134 to 857273
12270
mRNA_3903: 12271 - K01273 DPEP membrane dipeptidase, at 857570 to 859111
12271
mRNA_3904: 12272 - KOG1176 Acyl-CoA synthetase, at 859161 to 861426
12272
mRNA_3905: 12273 - KOG0118 FOG RRM domain, at 862046 to 863996
12273
Group
Condition
mRNA_3901
mRNA_3902
mRNA_3903
mRNA_3904
mRNA_3905
12269
12270
12271
12272
12273
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.3
0.0
-1.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
0.0
-1.4
growth on oleic acid
YNB Glucose
-0.6
-0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.2
-0.2
-0.4
auxotrophy
YNB Glucose
0.2
-0.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.5
0.0
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.2
0.2
-0.7
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.3
0.3
auxotrophy
Dropout Complete
0.1
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.2
-0.5
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.3
-0.4
0.8
growth on ypd
YPD
0.1
0.0
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
0.0
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.2
-0.0
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.2
-0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.4
0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
0.1
1.1
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