Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3887: 12255 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 826218 to 829062 12255 mRNA_3888: 12256 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 829400 to 831173 12256 mRNA_3889: 12257 - K00587 ICMT, STE14 protein-S-isoprenylcysteine O-methyltransferase, at 831384 to 832562 12257 mRNA_3890: 12258 - HMMPfam-Pal1 cell morphology protein-PF08316, at 832975 to 835014 12258 mRNA_3891: 12259 - K07889 RAB5C Ras-related protein Rab-5C, at 835230 to 836530 12259
Group Condition mRNA_3887 mRNA_3888 mRNA_3889 mRNA_3890 mRNA_3891
12255
12256
12257
12258
12259
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 -1.4 0.8 -2.1
facs on lipid accumulation Sorted High BODIPY Gate -0.7 0.3 -1.1 0.0 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 -0.8 0.0 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 -1.0 1.1 -1.3
growth on oleic acid YNB Glucose -0.4 -0.3 -0.0 0.5 -1.3
growth on ypd YPD 0.2 0.1 -1.1 -0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -0.0 -0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -1.0 0.7 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.1 -0.4 -0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.0 0.0 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.0 -0.0 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 0.0 0.9 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -0.6 -0.5 1.5
auxotrophy YNB Glucose 0.0 0.1 -0.4 1.0 -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.2 0.4 0.7 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.4 0.4 0.3 -0.3
auxotrophy Dropout Complete -0.0 0.1 -0.1 0.9 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.0 -0.0 -0.0 0.9
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 0.1 0.2 0.8
ypd buoyancy 40 hrs High Buoyancy -0.2 0.4 0.4 -0.3 0.7
auxotrophy YNB Glucose 75mM Methionine -0.1 0.2 -0.2 1.0 0.5
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