Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3885: 12253 - K00773 tgt, QTRT1 queuine tRNA-ribosyltransferase, at 822787 to 823648 12253 mRNA_3886: 12254 - K14298 RAE1, GLE2 mRNA export factor, at 823913 to 825750 12254 mRNA_3887: 12255 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 826218 to 829062 12255 mRNA_3888: 12256 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 829400 to 831173 12256 mRNA_3889: 12257 - K00587 ICMT, STE14 protein-S-isoprenylcysteine O-methyltransferase, at 831384 to 832562 12257
Group Condition mRNA_3885 mRNA_3886 mRNA_3887 mRNA_3888 mRNA_3889
12253
12254
12255
12256
12257
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.7 -0.2 0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.4 -0.5 -0.1 -1.4
growth on ricinoleic acid YNB Glucose -0.5 -0.5 -0.1 -0.1 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.4 -0.7 0.3 -1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.4 -0.4 -0.1 -1.0
growth on oleic acid YNB Glucose -0.8 -0.2 -0.4 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.4 -0.3 -0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.5 -0.1 -0.2 -0.0
auxotrophy YNB Glucose -0.4 -0.4 0.0 0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.2 0.4 0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.3 -0.1 0.2 -0.2
auxotrophy Dropout Complete -0.4 -0.3 -0.0 0.1 -0.1
growth on ypd YPD -0.2 0.1 0.2 0.1 -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.4 -0.4 0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.2 -0.2 0.4 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.6 -0.4 -0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1 -0.3 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.3 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2 0.1 0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.4 -0.1 -0.1 -0.2 0.4
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.2 0.4 0.4
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