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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811174 to 811650
12247
mRNA_3880: 12248 - K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+), at 812217 to 813988
12248
mRNA_3881: 12249 - Hypothetical Protein, at 814368 to 814862
12249
mRNA_3882: 12250 - Hypothetical Protein, at 815200 to 816864
12250
mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111
12251
Group
Condition
mRNA_3879
mRNA_3880
mRNA_3881
mRNA_3882
mRNA_3883
12247
12248
12249
12250
12251
auxotrophy
YNB Glucose
0.2
-4.0
-0.0
0.1
0.0
growth on oleic acid
YNB Glucose
0.1
-3.4
-0.3
0.2
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
-3.3
-0.2
0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-1.6
-0.3
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-1.6
-0.4
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-1.7
0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-2.9
0.0
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-2.1
0.4
0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-1.9
0.3
0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.1
-0.7
-0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.7
-2.0
-0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-1.1
0.4
-0.3
-0.1
growth on oleic acid
YNB Oleic Acid
0.3
-1.0
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.8
-0.0
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.5
-0.0
-0.2
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.4
-0.2
-0.3
0.0
auxotrophy
YNB Glucose 75mM Arginine
1.1
-1.6
0.1
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-1.5
0.5
0.5
-0.0
growth on ypd
YPD
0.3
-0.2
-0.3
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.2
0.5
-0.2
-0.2
auxotrophy
Dropout Complete
0.7
-0.2
-0.0
-0.0
-0.1
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