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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800106 to 800939
12241
mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801011 to 802122
12242
mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802441 to 804314
12243
mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804740 to 806816
12244
mRNA_3877: 12245 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 807234 to 808789
12245
Group
Condition
mRNA_3873
mRNA_3874
mRNA_3875
mRNA_3876
mRNA_3877
12241
12242
12243
12244
12245
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.5
-0.3
-1.3
growth on ypd
YPD
0.0
-0.2
-0.0
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.2
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.3
0.4
-0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.1
-0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.2
0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.1
0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.4
0.2
-0.3
growth on oleic acid
YNB Glucose
0.2
-0.3
0.0
0.0
growth on ricinoleic acid
YNB Glucose
0.0
-0.4
0.3
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.8
0.5
0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.4
0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.4
0.2
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.5
0.5
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.5
0.5
0.4
auxotrophy
YNB Glucose
0.2
-0.2
0.6
-0.3
auxotrophy
Dropout Complete
0.1
-0.2
0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.4
-0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
0.4
0.2
0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.2
0.0
0.5
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