Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794856 to 799909 12240 mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800106 to 800939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801011 to 802122 12242 mRNA_3875: 12243 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 802441 to 804314 12243 mRNA_3876: 12244 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 804740 to 806816 12244
Group Condition mRNA_3872 mRNA_3873 mRNA_3874 mRNA_3875 mRNA_3876
12240
12241
12242
12243
12244
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.5 -0.5 -0.3 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.8 -0.2 -0.1 -0.1
growth on ypd YPD -0.2 0.0 -0.2 -0.0 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.2 -0.2 0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 0.1 0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 0.2 -0.3 0.4 -0.5
growth on oleic acid YNB Glucose -0.3 0.2 -0.3 0.0 0.0
growth on ricinoleic acid YNB Glucose -0.2 0.0 -0.4 0.3 0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 0.3 -0.1 0.3 -0.7
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.1 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.5 -0.5 0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.1 0.2 -0.4 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.4 -0.4 0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.4 0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3 -0.8 0.5 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.5 0.5 0.4
auxotrophy Dropout Complete -0.0 0.1 -0.2 0.5 -0.0
auxotrophy YNB Glucose 0.1 0.2 -0.2 0.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 0.4 -0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.3 0.2 0.0 0.5
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4 0.2 0.1 -0.0
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