Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789914 to 792634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792939 to 793930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794856 to 799909 12240 mRNA_3873: 12241 - BLAST putative protein [Neurospora crassa], at 800106 to 800939 12241 mRNA_3874: 12242 - KOG1535 Predicted fumarylacetoacetate hydralase, at 801011 to 802122 12242
Group Condition mRNA_3870 mRNA_3871 mRNA_3872 mRNA_3873 mRNA_3874
12238
12239
12240
12241
12242
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 -0.3 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.0 -0.0 -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 -0.3 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0 -0.2 0.5 -0.5
growth on oleic acid YNB Glucose -0.1 -0.2 -0.3 0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.2 0.2 -0.2 0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.4 0.2 -0.1 0.2 -0.3
growth on ypd YPD 0.0 -0.1 -0.2 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 0.1 0.3 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 0.3 -0.5 -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.0 -0.1 0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 0.3 -0.4 0.3 0.2
auxotrophy Dropout Complete -0.2 0.1 -0.0 0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 0.2 0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 -0.0 -0.2 0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 -0.0 0.3 -0.1
auxotrophy YNB Glucose -0.2 0.3 0.1 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.0 -0.1 0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.1 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 0.1 -0.1 0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 0.1 0.4 0.2
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