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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783972 to 787068
12236
mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787277 to 789620
12237
mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789914 to 792634
12238
mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792939 to 793930
12239
mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794856 to 799909
12240
Group
Condition
mRNA_3868
mRNA_3869
mRNA_3870
mRNA_3871
mRNA_3872
12236
12237
12238
12239
12240
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
-0.4
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
-0.4
-0.2
-0.3
growth on ypd
YPD
-0.0
-0.4
0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
-0.5
-0.0
-0.0
growth on oleic acid
YNB Glucose
0.1
-0.2
-0.1
-0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.8
0.1
0.2
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.2
-0.5
-0.0
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
-0.2
0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.2
-0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.2
-0.4
0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.4
-0.0
0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.2
-0.7
0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
-0.3
0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.2
0.1
-0.0
growth on oleic acid
YNB Oleic Acid
0.3
-0.2
-0.1
-0.0
-0.1
auxotrophy
Dropout Complete
-0.0
0.0
-0.2
0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
-0.0
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.1
-0.2
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
-0.1
-0.0
0.1
auxotrophy
YNB Glucose
-0.0
-0.1
-0.2
0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.0
-0.2
0.2
0.1
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