Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783972 to 787068 12236 mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787277 to 789620 12237 mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789914 to 792634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792939 to 793930 12239 mRNA_3872: 12240 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 794856 to 799909 12240
Group Condition mRNA_3868 mRNA_3869 mRNA_3870 mRNA_3871 mRNA_3872
12236
12237
12238
12239
12240
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 -0.4 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 -0.4 -0.2 -0.3
growth on ypd YPD -0.0 -0.4 0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 -0.5 -0.0 -0.0
growth on oleic acid YNB Glucose 0.1 -0.2 -0.1 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.8 0.1 0.2 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.2 -0.5 -0.0 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.1 -0.2 0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.2 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 0.2 -0.4 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 -0.0 0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.2 -0.7 0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 -0.3 0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.2 0.1 -0.0
growth on oleic acid YNB Oleic Acid 0.3 -0.2 -0.1 -0.0 -0.1
auxotrophy Dropout Complete -0.0 0.0 -0.2 0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.2 -0.0 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.1 -0.2 -0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.0 0.1
auxotrophy YNB Glucose -0.0 -0.1 -0.2 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.0 -0.2 0.2 0.1
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