Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3867: 12235 - KOG1812 Predicted E3 ubiquitin ligase, at 782825 to 783717 12235 mRNA_3868: 12236 - KOG0603 Ribosomal protein S6 kinase, at 783972 to 787068 12236 mRNA_3869: 12237 - KOG3207 Beta-tubulin folding cofactor E, at 787277 to 789620 12237 mRNA_3870: 12238 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448, at 789914 to 792634 12238 mRNA_3871: 12239 - K10295 FBXO9 F-box protein 9, at 792939 to 793930 12239
Group Condition mRNA_3867 mRNA_3868 mRNA_3869 mRNA_3870 mRNA_3871
12235
12236
12237
12238
12239
growth on oleic acid YNB Glucose -0.6 0.1 -0.2 -0.1 -0.2
growth on ypd YPD -0.4 -0.0 -0.4 0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.2 -0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.8 0.3 -0.2 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.3 -0.8 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 0.5 -0.2 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 -0.2 -0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 0.1 -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.0 -0.4 -0.0 0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.1 -0.1 -0.2 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.2 -0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2 0.2 -0.4 0.2
auxotrophy YNB Glucose 0.1 -0.0 -0.1 -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1 -0.1 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.1 -0.0 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.3 0.2 -0.7 0.3
auxotrophy Dropout Complete 0.5 -0.0 0.0 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.2 0.1 -0.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4 -0.0 -0.2 0.2
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