Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767659 to 769319 12230 mRNA_3863: 12231 - KOG1434 Meiotic recombination protein Dmc1, at 769821 to 771118 12231 mRNA_3864: 12232 - K08737 MSH6 DNA mismatch repair protein MSH6, at 771424 to 775679 12232 mRNA_3865: 12233 - HMMPfam-DASH complex subunit Spc34-PF08657, at 777036 to 778951 12233 mRNA_3866: 12234 - Hypothetical Protein, at 780640 to 781665 12234
Group Condition mRNA_3862 mRNA_3863 mRNA_3864 mRNA_3865 mRNA_3866
12230
12231
12232
12233
12234
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   0.1 -1.8  
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.0 -1.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   -0.1 -1.1  
auxotrophy Dropout Complete 0.3   0.0 -1.5  
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.1 -1.4  
auxotrophy YNB Glucose 75mM Arginine -0.1   0.1 -0.8  
auxotrophy YNB Glucose 75mM Methionine -0.1   0.1 -0.8  
ypd buoyancy 40 hrs No Buoyancy Separation -0.8   0.1 0.1  
auxotrophy YNB Glucose 0.1   0.0 -0.7  
growth on ricinoleic acid YNB Glucose 0.4   0.1 -0.9  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4   0.1 -0.8  
ypd buoyancy 40 hrs High Buoyancy -0.1   0.2 -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.2   0.1 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   0.1 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.6   0.3 -0.8  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   0.1 -0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.1 0.2  
growth on oleic acid YNB Glucose 0.3   -0.0 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3   0.2 0.6  
growth on ypd YPD -0.1   -0.1 0.7  
growth on oleic acid YNB Oleic Acid 0.2   0.1 0.6  
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