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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766288 to 767441
12229
mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767659 to 769319
12230
mRNA_3863: 12231 - KOG1434 Meiotic recombination protein Dmc1, at 769821 to 771118
12231
mRNA_3864: 12232 - K08737 MSH6 DNA mismatch repair protein MSH6, at 771424 to 775679
12232
mRNA_3865: 12233 - HMMPfam-DASH complex subunit Spc34-PF08657, at 777036 to 778951
12233
Group
Condition
mRNA_3861
mRNA_3862
mRNA_3863
mRNA_3864
mRNA_3865
12229
12230
12231
12232
12233
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.5
0.1
-1.8
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.8
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.0
-0.1
-1.1
auxotrophy
Dropout Complete
0.4
0.3
0.0
-1.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
0.1
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.1
-0.0
-1.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
0.1
-0.8
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.1
0.1
-0.8
auxotrophy
YNB Glucose
0.2
0.1
0.0
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.4
0.1
-0.8
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
0.2
-0.1
growth on ricinoleic acid
YNB Glucose
0.4
0.4
0.1
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.2
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
0.1
0.2
growth on oleic acid
YNB Glucose
-0.0
0.3
-0.0
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.6
0.3
-0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
0.1
-0.0
growth on ypd
YPD
0.2
-0.1
-0.1
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.3
0.2
0.6
growth on oleic acid
YNB Oleic Acid
0.1
0.2
0.1
0.6
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